Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488055_0272 | Not Available | Positive | 331389 - 331634 | 9071.71 |
| hypothetical protein | SAMN04488055_0273 | Not Available | Positive | 331780 - 332019 | 8477.12 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488055_0274 | Not Available | Negative | 332067 - 333350 | 48591.9 |
| hypothetical protein | SAMN04488055_0275 | Not Available | Positive | 333383 - 334417 | 39205.4 |
| susd family protein | SAMN04488055_0276 | Not Available | Negative | 334424 - 335791 | 50686.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0277 | Not Available | Negative | 335812 - 339093 | 120785.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_0278 | Not Available | Negative | 339335 - 339889 | 21568.2 |
| protein of unknown function | SAMN04488055_0279 | Not Available | Positive | 340357 - 341475 | 42029.4 |
| glycosyl hydrolases family 43 | SAMN04488055_0280 | Not Available | Negative | 341529 - 342500 | 37228.5 |
| two-component response regulator, sapr family, consists of rec, whth and btad domains | SAMN04488055_0282 | Not Available | Positive | 343191 - 345671 | 94773.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
