Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muts domain iii | SAMN04488055_0252 | Not Available | Positive | 301785 - 303149 | 50780.2 |
| atpase | SAMN04488055_0253 | Not Available | Negative | 303169 - 306354 | 123021.0 |
| chat domain-containing protein | SAMN04488055_0254 | Not Available | Negative | 306354 - 308201 | 69408.8 |
| caspase domain-containing protein | SAMN04488055_0255 | Not Available | Positive | 308432 - 311812 | 124970.0 |
| serine protease, subtilisin family | SAMN04488055_0256 | Not Available | Positive | 311833 - 314436 | 96027.5 |
| predicted transcriptional regulator ydee, contains arac-type dna-binding domain | SAMN04488055_0257 | Not Available | Positive | 314468 - 314923 | 16739.7 |
| protein of unknown function (du1801) | SAMN04488055_0258 | Not Available | Positive | 314920 - 315264 | 13725.3 |
| hypothetical protein | SAMN04488055_0259 | Not Available | Positive | 315409 - 315906 | 18449.5 |
| pas domain s-box-containing protein | SAMN04488055_0260 | Not Available | Positive | 315966 - 319547 | 133870.0 |
| uncharacterized sulfatase | SAMN04488055_0261 | Not Available | Positive | 319544 - 321520 | 73593.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
