Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN04488055_0222 | Not Available | Positive | 261896 - 262360 | 17759.5 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN04488055_0223 | Not Available | Negative | 262529 - 264127 | 59202.6 |
| hypothetical protein | SAMN04488055_0224 | Not Available | Negative | 264265 - 265533 | 47705.5 |
| tetratricopeptide repeat-containing protein | SAMN04488055_0225 | Not Available | Negative | 265661 - 267922 | 84686.0 |
| hypothetical protein | SAMN04488055_0226 | Not Available | Negative | 268099 - 268569 | 17788.7 |
| hypothetical protein | SAMN04488055_0227 | Not Available | Negative | 268566 - 268868 | 11429.7 |
| helix-turn-helix domain-containing protein | SAMN04488055_0228 | Not Available | Positive | 269045 - 269866 | 31056.5 |
| hypothetical protein | SAMN04488055_0229 | Not Available | Positive | 269935 - 270303 | 13037.6 |
| protein of unknown function | SAMN04488055_0230 | Not Available | Negative | 270360 - 272144 | 67803.7 |
| Trna-leu | Not Available | Not Available | Positive | 272282 - 272368 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
