Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l21p | SAMN04488055_0009 | Not Available | Negative | 8719 - 9021 | 11196.8 |
| gh3 auxin-responsive promoter | SAMN04488055_0010 | Not Available | Positive | 9345 - 10844 | 56669.9 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN04488055_0011 | Not Available | Positive | 10883 - 12121 | 45104.1 |
| regulator of sigma e protease | SAMN04488055_0012 | Not Available | Positive | 12175 - 13509 | 50695.3 |
| hypothetical protein | SAMN04488055_0014 | Not Available | Positive | 14085 - 14675 | 22775.6 |
| protein of unknown function | SAMN04488055_0015 | Not Available | Negative | 14672 - 15028 | 12801.5 |
| hypothetical protein | SAMN04488055_0016 | Not Available | Negative | 15073 - 15861 | 30064.1 |
| iron complex outermembrane recepter protein | SAMN04488055_0017 | Not Available | Positive | 15882 - 18434 | 94869.4 |
| sefir domain-containing protein | SAMN04488055_0018 | Not Available | Negative | 18554 - 20338 | 67682.8 |
| hopj type iii effector protein | SAMN04488055_0019 | Not Available | Negative | 20547 - 20879 | 12578.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
