Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle-docking protein ftsy | SAMN04488055_1828 | Not Available | Negative | 2376300 - 2377262 | 34655.9 |
| alpha-l-fucosidase 2 | SAMN04488055_1829 | Not Available | Negative | 2377339 - 2379738 | 89645.3 |
| protein of unknown function | SAMN04488055_1830 | Not Available | Negative | 2379898 - 2380068 | 6160.56 |
| lsu ribosomal protein l33p | SAMN04488055_1831 | Not Available | Negative | 2380164 - 2380346 | 6975.56 |
| lsu ribosomal protein l28p | SAMN04488055_1832 | Not Available | Negative | 2380379 - 2380618 | 8984.03 |
| alkyl hydroperoxide reductase subunit d | SAMN04488055_1833 | Not Available | Negative | 2380735 - 2381322 | 20933.6 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN04488055_1834 | Not Available | Negative | 2381386 - 2381940 | 20861.8 |
| hypothetical protein | SAMN04488055_1835 | Not Available | Positive | 2382232 - 2382351 | 4445.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_1836 | Not Available | Negative | 2382541 - 2383095 | 22000.0 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN04488055_1837 | Not Available | Positive | 2383221 - 2384177 | 36172.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
