Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 2, sugar binding domain | SAMN04488055_1658 | Not Available | Negative | 2155476 - 2158715 | 119900.0 |
| hypothetical protein | SAMN04488055_1659 | Not Available | Positive | 2158959 - 2159474 | 19387.1 |
| Trna-leu | Not Available | Not Available | Positive | 2159535 - 2159618 | Not Available |
| hscb c-terminal oligomerisation domain-containing protein | SAMN04488055_1661 | Not Available | Negative | 2159625 - 2159966 | 13010.1 |
| alanine dehydrogenase | SAMN04488055_1662 | Not Available | Positive | 2160021 - 2161256 | 47050.4 |
| trna1val (adenine37-n6)-methyltransferase | SAMN04488055_1663 | Not Available | Negative | 2161219 - 2161923 | 25954.9 |
| alpha-l-fucosidase | SAMN04488055_1664 | Not Available | Negative | 2161923 - 2164022 | 78694.7 |
| o-sialoglycoprotein endopeptidase | SAMN04488055_1665 | Not Available | Negative | 2164033 - 2165040 | 35985.4 |
| putative abc transport system permease protein | SAMN04488055_1666 | Not Available | Negative | 2165060 - 2166310 | 45267.0 |
| bacterial peptide chain release factor 3 (brf-3) | SAMN04488055_1667 | Not Available | Positive | 2166422 - 2168005 | 60399.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
