Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488055_1497 | Not Available | Negative | 1947228 - 1947917 | 26197.9 |
| cation diffusion facilitator family transporter | SAMN04488055_1498 | Not Available | Negative | 1947925 - 1948908 | 36901.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_1499 | Not Available | Positive | 1949307 - 1952432 | 114138.0 |
| starch-binding associating with outer membrane | SAMN04488055_1500 | Not Available | Positive | 1952451 - 1954121 | 62381.7 |
| protein of unknown function | SAMN04488055_1501 | Not Available | Positive | 1954133 - 1954882 | 26891.4 |
| hypothetical protein | SAMN04488055_1502 | Not Available | Positive | 1954933 - 1955457 | 19923.6 |
| translation initiation factor if-3 | SAMN04488055_1503 | Not Available | Negative | 1955581 - 1956387 | 30709.0 |
| threonyl-trna synthetase | SAMN04488055_1504 | Not Available | Negative | 1956461 - 1958449 | 75152.1 |
| hypothetical protein | SAMN04488055_1505 | Not Available | Negative | 1958505 - 1959377 | 32210.1 |
| protein of unknown function | SAMN04488055_1506 | Not Available | Positive | 1959416 - 1960108 | 26166.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
