Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488055_1417 | Not Available | Positive | 1850917 - 1851180 | 10256.7 |
| membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domain | SAMN04488055_1418 | Not Available | Positive | 1851261 - 1852202 | 35515.1 |
| hypothetical protein | SAMN04488055_1419 | Not Available | Positive | 1852214 - 1852468 | 9335.01 |
| hypothetical protein | SAMN04488055_1420 | Not Available | Positive | 1852458 - 1853204 | 29675.9 |
| hypothetical protein | SAMN04488055_1421 | Not Available | Positive | 1853237 - 1854184 | 35474.0 |
| helix-turn-helix | SAMN04488055_1422 | Not Available | Positive | 1854362 - 1854568 | 7859.75 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN04488055_1423 | Not Available | Negative | 1854935 - 1855702 | 30780.1 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488055_1424 | Not Available | Positive | 1855956 - 1859141 | 117117.0 |
| peptide/nickel transport system substrate-binding protein | SAMN04488055_1425 | Not Available | Negative | 1859203 - 1860804 | 61246.6 |
| peptidase family m1 | SAMN04488055_1426 | Not Available | Positive | 1860924 - 1862564 | 62372.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
