Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | SAMN04488055_1236 | Not Available | Negative | 1651965 - 1663742 | 403934.0 |
| protein of unknown function | SAMN04488055_1237 | Not Available | Negative | 1663995 - 1665344 | 48614.5 |
| hypothetical protein | SAMN04488055_1238 | Not Available | Negative | 1665349 - 1666872 | 56150.8 |
| protein of unknown function | SAMN04488055_1239 | Not Available | Negative | 1666904 - 1667836 | 33100.3 |
| pkd-like domain-containing protein | SAMN04488055_1240 | Not Available | Negative | 1667886 - 1669346 | 54205.4 |
| hypothetical protein | SAMN04488055_1241 | Not Available | Negative | 1669351 - 1670493 | 42623.6 |
| tonb-dependent receptor plug domain | SAMN04488055_1242 | Not Available | Negative | 1670490 - 1672550 | 78548.3 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488055_1243 | Not Available | Positive | 1672943 - 1675351 | 90430.6 |
| signal transduction histidine kinase | SAMN04488055_1244 | Not Available | Negative | 1675459 - 1676505 | 39570.0 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488055_1245 | Not Available | Negative | 1676502 - 1677176 | 25367.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
