Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488055_1216 | Not Available | Positive | 1628010 - 1629446 | 53191.9 |
| ecsc protein family protein | SAMN04488055_1217 | Not Available | Positive | 1629498 - 1630208 | 27290.4 |
| helix-turn-helix domain-containing protein | SAMN04488055_1218 | Not Available | Positive | 1630205 - 1631053 | 33155.6 |
| predicted hydrolase of the alpha/beta superfamily | SAMN04488055_1219 | Not Available | Positive | 1631120 - 1632259 | 43452.6 |
| glyoxalase-like domain-containing protein | SAMN04488055_1220 | Not Available | Negative | 1632243 - 1632638 | 14886.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_1221 | Not Available | Positive | 1632772 - 1633353 | 21924.7 |
| protein of unknown function | SAMN04488055_1222 | Not Available | Positive | 1633438 - 1634637 | 44244.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_1223 | Not Available | Positive | 1634781 - 1638332 | 131760.0 |
| susd family protein | SAMN04488055_1224 | Not Available | Positive | 1638344 - 1639777 | 54190.7 |
| abc-2 type transport system atp-binding protein | SAMN04488055_1225 | Not Available | Positive | 1639861 - 1640802 | 34983.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
