Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialidase-1 | SAMN04488055_1156 | Not Available | Positive | 1562907 - 1564031 | 41517.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_1157 | Not Available | Positive | 1564190 - 1567321 | 115182.0 |
| starch-binding associating with outer membrane | SAMN04488055_1158 | Not Available | Positive | 1567340 - 1569175 | 68200.2 |
| sialidase-1 | SAMN04488055_1159 | Not Available | Positive | 1569179 - 1570780 | 58755.4 |
| n-acetylneuraminate lyase | SAMN04488055_1160 | Not Available | Positive | 1570777 - 1571703 | 33440.8 |
| hypothetical protein | SAMN04488055_1161 | Not Available | Positive | 1571706 - 1572689 | 35038.6 |
| predicted arabinose efflux permease, mfs family | SAMN04488055_1162 | Not Available | Positive | 1572693 - 1573904 | 44587.3 |
| a/g-specific dna-adenine glycosylase | SAMN04488055_1163 | Not Available | Positive | 1573941 - 1575173 | 44675.3 |
| cu2+-exporting atpase | SAMN04488055_1164 | Not Available | Negative | 1575198 - 1577396 | 79058.8 |
| dna-binding transcriptional regulator, arsr family | SAMN04488055_1165 | Not Available | Positive | 1577509 - 1577838 | 12005.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
