Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04488055_1116 | Not Available | Positive | 1503857 - 1505788 | 73070.0 |
| uncharacterized conserved protein | SAMN04488055_1117 | Not Available | Positive | 1505802 - 1506035 | 8991.89 |
| arac-like ligand binding domain-containing protein | SAMN04488055_1118 | Not Available | Negative | 1506032 - 1506844 | 31083.4 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488055_1119 | Not Available | Positive | 1507041 - 1507529 | 18621.3 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488055_1120 | Not Available | Negative | 1507561 - 1508319 | 28825.2 |
| two component regulator propeller | SAMN04488055_1121 | Not Available | Negative | 1508329 - 1511445 | 118389.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_1122 | Not Available | Positive | 1511785 - 1514952 | 118014.0 |
| starch-binding associating with outer membrane | SAMN04488055_1123 | Not Available | Positive | 1514974 - 1516872 | 69936.0 |
| protein of unknown function | SAMN04488055_1124 | Not Available | Positive | 1516891 - 1517592 | 25437.7 |
| hypothetical protein | SAMN04488055_1125 | Not Available | Positive | 1517680 - 1518702 | 38969.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
