Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase | SAMN04488055_1106 | Not Available | Positive | 1486384 - 1488111 | 64062.6 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488055_1107 | Not Available | Positive | 1488115 - 1488720 | 23883.8 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN04488055_1108 | Not Available | Positive | 1488789 - 1489850 | 39665.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_1109 | Not Available | Positive | 1490049 - 1493837 | 137215.0 |
| starch-binding associating with outer membrane | SAMN04488055_1110 | Not Available | Positive | 1493856 - 1495478 | 59962.7 |
| regulatory protein, luxr family | SAMN04488055_1111 | Not Available | Negative | 1495822 - 1498641 | 107244.0 |
| glycosyl hydrolases family 16 | SAMN04488055_1112 | Not Available | Positive | 1498896 - 1500107 | 44229.9 |
| hypothetical protein | SAMN04488055_1113 | Not Available | Positive | 1500146 - 1501009 | 31131.3 |
| glutamate-5-semialdehyde dehydrogenase | SAMN04488055_1114 | Not Available | Negative | 1501373 - 1502620 | 45194.3 |
| glutamate 5-kinase | SAMN04488055_1115 | Not Available | Negative | 1502635 - 1503672 | 36762.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
