Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type multidrug transport system, atpase component | SAMN04488055_1005 | Not Available | Negative | 1346672 - 1347541 | 31513.5 |
| histidine kinase | SAMN04488055_1006 | Not Available | Positive | 1347708 - 1349144 | 54478.9 |
| dna-binding response regulator, lytr/algr family | SAMN04488055_1007 | Not Available | Positive | 1349119 - 1349823 | 27045.3 |
| protein of unknown function | SAMN04488055_1008 | Not Available | Positive | 1349861 - 1350568 | 27414.2 |
| superfamily ii dna and rna helicase | SAMN04488055_1009 | Not Available | Negative | 1350585 - 1351853 | 46939.9 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488055_1010 | Not Available | Positive | 1351972 - 1354326 | 89990.1 |
| hypothetical protein | SAMN04488055_1011 | Not Available | Positive | 1354415 - 1355065 | 23685.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488055_1012 | Not Available | Positive | 1355193 - 1357538 | 86312.3 |
| hypothetical protein | SAMN04488055_1013 | Not Available | Positive | 1357571 - 1358896 | 50570.4 |
| putative membrane protein | SAMN04488055_1014 | Not Available | Negative | 1358846 - 1359217 | 13787.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
