Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Parasphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Parasphingorhabdus |
| Species | Parasphingorhabdus marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
758321 bp
Thymine Count
754436 bp
Guanine Count
1018748 bp
Cytosine Count
1016423 bp
Genome Length
3547928 bp
Protein-coding Genes
3382 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02745824_3110 | Not Available | Positive | 3178979 - 3179248 | 9989.52 |
| outer membrane receptor proteins, mostly fe transport | SAMN02745824_3111 | Not Available | Positive | 3179439 - 3181568 | 77453.1 |
| atp-binding cassette, subfamily b | SAMN02745824_3112 | Not Available | Positive | 3181617 - 3183425 | 66557.9 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN02745824_3113 | Not Available | Positive | 3183547 - 3184944 | 51872.9 |
| uncharacterized conserved protein, alpha-e superfamily | SAMN02745824_3114 | Not Available | Positive | 3184949 - 3185890 | 35932.8 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN02745824_3115 | Not Available | Positive | 3185893 - 3186693 | 29414.7 |
| putative proteasome-type protease | SAMN02745824_3116 | Not Available | Positive | 3186738 - 3187469 | 26942.0 |
| atp-dependent dna helicase recq | SAMN02745824_3117 | Not Available | Positive | 3187534 - 3189324 | 65383.4 |
| hypothetical protein | SAMN02745824_3118 | Not Available | Positive | 3189321 - 3189692 | 14131.9 |
| tigr01244 family protein | SAMN02745824_3119 | Not Available | Positive | 3189809 - 3190240 | 14683.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
