Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Parasphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Parasphingorhabdus |
| Species | Parasphingorhabdus marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
758321 bp
Thymine Count
754436 bp
Guanine Count
1018748 bp
Cytosine Count
1016423 bp
Genome Length
3547928 bp
Protein-coding Genes
3382 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | SAMN02745824_2449 | Not Available | Negative | 2493673 - 2494872 | 44093.3 |
| carboxynorspermidine decarboxylase | SAMN02745824_2450 | Not Available | Negative | 2495000 - 2496172 | 43145.1 |
| carboxynorspermidine dehydrogenase | SAMN02745824_2451 | Not Available | Negative | 2496172 - 2497389 | 45249.8 |
| l-threonine ammonia-lyase | SAMN02745824_2452 | Not Available | Positive | 2497461 - 2498423 | 33923.8 |
| 5-aminolevulinate synthase | SAMN02745824_2453 | Not Available | Negative | 2498424 - 2499644 | 44392.2 |
| glutamate racemase | SAMN02745824_2454 | Not Available | Negative | 2499749 - 2500561 | 29163.2 |
| acyl-phosphate glycerol-3-phosphate acyltransferase | SAMN02745824_2455 | Not Available | Positive | 2500709 - 2501311 | 20993.4 |
| dna processing protein | SAMN02745824_2456 | Not Available | Positive | 2501308 - 2502444 | 40740.7 |
| dna topoisomerase i | SAMN02745824_2457 | Not Available | Positive | 2502550 - 2505126 | 94955.0 |
| gtp-binding protein era | SAMN02745824_2458 | Not Available | Negative | 2505154 - 2506047 | 32946.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
