Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Parasphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Parasphingorhabdus |
| Species | Parasphingorhabdus marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
758321 bp
Thymine Count
754436 bp
Guanine Count
1018748 bp
Cytosine Count
1016423 bp
Genome Length
3547928 bp
Protein-coding Genes
3382 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | SAMN02745824_2145 | Not Available | Negative | 2212555 - 2213169 | 21678.0 |
| tryptophan 2,3-dioxygenase | SAMN02745824_2146 | Not Available | Positive | 2213186 - 2213965 | 29798.7 |
| protein of unknown function | SAMN02745824_2147 | Not Available | Negative | 2213969 - 2215306 | 47956.2 |
| ribosome-associated protein | SAMN02745824_2148 | Not Available | Negative | 2215458 - 2215859 | 15190.6 |
| two component transcriptional regulator, winged helix family | SAMN02745824_2149 | Not Available | Positive | 2216221 - 2216928 | 26332.0 |
| serine/threonine protein phosphatase 1 | SAMN02745824_2150 | Not Available | Negative | 2217011 - 2217778 | 29126.9 |
| uncharacterized conserved protein | SAMN02745824_2151 | Not Available | Negative | 2217887 - 2219068 | 42096.3 |
| dctp deaminase | SAMN02745824_2152 | Not Available | Negative | 2219119 - 2219673 | 20425.4 |
| lysozyme | SAMN02745824_2153 | Not Available | Negative | 2219715 - 2220407 | 25567.7 |
| uncharacterized protein, upf0262 family | SAMN02745824_2154 | Not Available | Negative | 2220459 - 2220941 | 18666.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
