Sphingorhabdus marina DSM 22363

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Parasphingorhabdus

Description

Sphingorhabdus marina DSM 22363 is a Gram-negative, aerobic bacterium characterized by its rod shape. This species thrives optimally at a temperature of 29°C, indicating its mesophilic nature, as it prefers moderate temperature conditions for growth. Notably, Sphingorhabdus marina is non-spore-forming and possesses a single replicon, which may reflect its genomic stability and adaptability within its ecological niche. The aerobic requirement of Sphingorhabdus marina suggests that it plays a role in environments where oxygen is present, potentially participating in biogeochemical cycles. Its mesophilic growth range indicates that it may be well-suited to temperate marine environments, where temperatures can fluctuate around its optimal growth conditions. Understanding the characteristics of Sphingorhabdus marina, particularly its oxygen requirements and temperature preferences, can provide insights into its ecological role in marine ecosystems. As an aerobic organism, it may contribute to the degradation of organic matter and nutrient cycling, thus influencing the overall health and functioning of its habitat. The genomic accessions, such as FSQW00000000.1, can offer further opportunities for studying its genetic makeup and potential applications in biotechnology or environmental sciences.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusParasphingorhabdus
SpeciesParasphingorhabdus marina
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus marina DSM 22363 genome assembly, contig:

Gene Summary

Adenine Count

758321 bp

Thymine Count

754436 bp

Guanine Count

1018748 bp

Cytosine Count

1016423 bp

Genome Length

3547928 bp

Protein-coding Genes

3382 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome p450SAMN02745824_1211Not AvailablePositive1189675 - 119108452953.0
predicted dehydrogenaseSAMN02745824_1212Not AvailablePositive1191109 - 119218238745.2
d-xylose reductaseSAMN02745824_1213Not AvailablePositive1192202 - 119315235398.1
taurine dioxygenase, alpha-ketoglutarate-dependentSAMN02745824_1214Not AvailablePositive1193145 - 119408934889.8
solute:na+ symporter, sss familySAMN02745824_1215Not AvailableNegative1194082 - 119580362028.7
molybdenum cofactor cytidylyltransferaseSAMN02745824_1216Not AvailableNegative1195887 - 119648621029.2
cytochrome cSAMN02745824_1217Not AvailableNegative1196508 - 119698415823.6
isoquinoline 1-oxidoreductase, beta subunitSAMN02745824_1218Not AvailableNegative1197007 - 119921478912.9
isoquinoline 1-oxidoreductase, alpha subunitSAMN02745824_1219Not AvailableNegative1199217 - 119969616758.0
xanthine dehydrogenase accessory factorSAMN02745824_1220Not AvailableNegative1199796 - 120074934417.8

Displaying genes 1201 – 1210 of 3446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.