Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1589816 bp
Thymine Count
1610241 bp
Guanine Count
2019332 bp
Cytosine Count
1965529 bp
Genome Length
7731848 bp
Protein-coding Genes
6349 genes
Non-Coding Genes
126 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein dacb1 | SAMEA2275861_00671 | Not Available | Negative | 663863 - 665179 | 45578.4 |
| strictosidine synthase family protein | SAMEA2275861_00672 | Not Available | Negative | 665218 - 666246 | 35964.1 |
| rna polymerase sigma-70 factor | SAMEA2275861_00673 | Not Available | Positive | 666280 - 667188 | 33010.4 |
| alkylhydroperoxidase like protein, ahpd family | SAMEA2275861_00674 | Not Available | Negative | 667185 - 667784 | 22025.3 |
| succinate dehydrogenase, iron-sulfur subunit | SAMEA2275861_00675 | Not Available | Negative | 667891 - 668673 | 29057.2 |
| succinate dehydrogenase | SAMEA2275861_00676 | Not Available | Negative | 668675 - 670441 | 64846.0 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | SAMEA2275861_00677 | Not Available | Negative | 670455 - 670937 | 18327.4 |
| succinate dehydrogenase, cytochrome b556 subunit | SAMEA2275861_00678 | Not Available | Negative | 670934 - 671356 | 15928.8 |
| cytidine deaminase | SAMEA2275861_00679 | Not Available | Positive | 671616 - 672014 | 14179.1 |
| pyrimidine-nucleoside phosphorylase | SAMEA2275861_00680 | Not Available | Positive | 672014 - 673303 | 43739.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
