Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1589816 bp
Thymine Count
1610241 bp
Guanine Count
2019332 bp
Cytosine Count
1965529 bp
Genome Length
7731848 bp
Protein-coding Genes
6349 genes
Non-Coding Genes
126 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate permease | SAMEA2275861_06329 | Not Available | Positive | 7072610 - 7073416 | 28676.7 |
| isopentenyl pyrophosphate isomerase | SAMEA2275861_06330 | Not Available | Negative | 7073823 - 7074293 | 17656.2 |
| diaminopimelate decarboxylase | SAMEA2275861_06331 | Not Available | Negative | 7079180 - 7080445 | 46745.7 |
| amidohydrolase | SAMEA2275861_06332 | Not Available | Negative | 7081607 - 7082143 | 20466.2 |
| carbonic anhydrase | SAMEA2275861_06333 | Not Available | Negative | 7083100 - 7083819 | 25160.1 |
| dihydrodipicolinate reductase | SAMEA2275861_06334 | Not Available | Negative | 7083842 - 7084564 | 26748.7 |
| dihydrodipicolinate synthase dapa | SAMEA2275861_06335 | Not Available | Negative | 7084561 - 7085232 | 24650.9 |
| formate dehydrogenase accessory protein fdhd | SAMEA2275861_06336 | Not Available | Positive | 7085417 - 7086214 | 29619.5 |
| uncharacterised protein | SAMEA2275861_06337 | Not Available | Negative | 7086283 - 7087041 | 29303.0 |
| bioy protein | SAMEA2275861_06338 | Not Available | Negative | 7087057 - 7087605 | 19581.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
