Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1589816 bp
Thymine Count
1610241 bp
Guanine Count
2019332 bp
Cytosine Count
1965529 bp
Genome Length
7731848 bp
Protein-coding Genes
6349 genes
Non-Coding Genes
126 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine ammonia-lyase large subunit | SAMEA2275861_00519 | Not Available | Positive | 524178 - 525581 | 49661.4 |
| ethanolamine ammonia-lyase small subunit | SAMEA2275861_00520 | Not Available | Positive | 525578 - 526363 | 26812.0 |
| acetyl-coa acetyltransferase | SAMEA2275861_00521 | Not Available | Positive | 526390 - 527913 | 53919.3 |
| cytochrome p450-terp | SAMEA2275861_00522 | Not Available | Negative | 527921 - 529177 | 46771.8 |
| phenylacetic acid degradation-like protein | SAMEA2275861_00523 | Not Available | Negative | 529246 - 529812 | 20411.7 |
| pyridoxamine 5'-phosphate oxidase | SAMEA2275861_00524 | Not Available | Negative | 529775 - 530443 | 24548.0 |
| uncharacterised protein | SAMEA2275861_00525 | Not Available | Negative | 530472 - 530684 | 7666.05 |
| 30s ribosomal protein s10 | SAMEA2275861_00526 | Not Available | Positive | 530831 - 531136 | 11433.9 |
| lsu ribosomal protein l3p | SAMEA2275861_00527 | Not Available | Positive | 531151 - 531804 | 22951.7 |
| 50s ribosomal protein l4 | SAMEA2275861_00528 | Not Available | Positive | 531804 - 532460 | 23265.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
