Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1589816 bp
Thymine Count
1610241 bp
Guanine Count
2019332 bp
Cytosine Count
1965529 bp
Genome Length
7731848 bp
Protein-coding Genes
6349 genes
Non-Coding Genes
126 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase sodm | SAMEA2275861_00369 | Not Available | Negative | 389204 - 389953 | 27559.1 |
| methylthioadenosine phosphorylase | SAMEA2275861_00370 | Not Available | Positive | 390079 - 390915 | 29719.3 |
| pyridoxamine 5'-phosphate oxidase | SAMEA2275861_00371 | Not Available | Negative | 390912 - 391409 | 18021.1 |
| polyketide cyclase / dehydrase and lipid transport | SAMEA2275861_00372 | Not Available | Positive | 391462 - 391920 | 17138.4 |
| cupin | SAMEA2275861_00373 | Not Available | Negative | 391921 - 392439 | 18678.0 |
| putative o-succinylbenzoate--coa ligase | SAMEA2275861_00374 | Not Available | Negative | 392475 - 393623 | 39522.5 |
| protein of uncharacterised function (duf3349) | SAMEA2275861_00375 | Not Available | Negative | 393620 - 393961 | 12540.8 |
| uncharacterised protein | SAMEA2275861_00376 | Not Available | Positive | 394025 - 394240 | 7788.51 |
| probable low-affinity inorganic phosphate transporter | SAMEA2275861_00377 | Not Available | Positive | 394237 - 395544 | 45065.1 |
| transmembrane protein | SAMEA2275861_00378 | Not Available | Positive | 395574 - 395855 | 9574.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
