Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1589816 bp
Thymine Count
1610241 bp
Guanine Count
2019332 bp
Cytosine Count
1965529 bp
Genome Length
7731848 bp
Protein-coding Genes
6349 genes
Non-Coding Genes
126 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head-to-tail connector | SAMEA2275861_04179 | Not Available | Negative | 4062688 - 4063164 | 17789.7 |
| Head-to-tail connector | SAMEA2275861_04180 | Not Available | Negative | 4063158 - 4063544 | 13857.2 |
| Head-to-tail connector | SAMEA2275861_04181 | Not Available | Negative | 4063547 - 4063870 | 11703.1 |
| Head-to-tail adaptor | SAMEA2275861_04182 | Not Available | Negative | 4063861 - 4064283 | 15724.8 |
| Hypothetical protein | SAMEA2275861_04183 | Not Available | Negative | 4064283 - 4064717 | 14423.4 |
| Major capsid protein | SAMEA2275861_04184 | Not Available | Negative | 4064717 - 4065775 | 37959.2 |
| Capsid decoration protein | SAMEA2275861_04185 | Not Available | Negative | 4065790 - 4066203 | 14426.7 |
| Scaffolding protein | SAMEA2275861_04186 | Not Available | Negative | 4066218 - 4066934 | 25173.0 |
| Capsid morphogenesis f-mu-like protein | SAMEA2275861_04187 | Not Available | Negative | 4067007 - 4068182 | 41756.5 |
| Portal protein | SAMEA2275861_04188 | Not Available | Negative | 4068166 - 4069641 | 54808.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
