Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1589816 bp
Thymine Count
1610241 bp
Guanine Count
2019332 bp
Cytosine Count
1965529 bp
Genome Length
7731848 bp
Protein-coding Genes
6349 genes
Non-Coding Genes
126 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain-fatty-acid--coa ligase fadd | SAMEA2275861_00159 | Not Available | Negative | 166560 - 168062 | 53444.2 |
| acyl-coa dehydrogenase fade | SAMEA2275861_00160 | Not Available | Negative | 168072 - 169169 | 38811.7 |
| acyl-coa dehydrogenase fade | SAMEA2275861_00161 | Not Available | Negative | 169186 - 170364 | 43126.3 |
| ferredoxin fdxd | SAMEA2275861_00162 | Not Available | Positive | 170594 - 170785 | 6956.23 |
| putative short-chain type dehydrogenase/reductase | SAMEA2275861_00163 | Not Available | Positive | 170869 - 171774 | 30888.4 |
| membrane protein yrbe4a | SAMEA2275861_00164 | Not Available | Positive | 172011 - 172778 | 26774.6 |
| pseudouridine synthase domain protein | SAMEA2275861_00165 | Not Available | Positive | 172778 - 172876 | 3677.46 |
| abc transporter permease | SAMEA2275861_00166 | Not Available | Positive | 172876 - 173736 | 29818.7 |
| virulence factor mce family protein | SAMEA2275861_00167 | Not Available | Positive | 173752 - 174951 | 42669.3 |
| mce-family protein, mce4b | SAMEA2275861_00168 | Not Available | Positive | 174951 - 175985 | 37338.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
