Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1589816 bp
Thymine Count
1610241 bp
Guanine Count
2019332 bp
Cytosine Count
1965529 bp
Genome Length
7731848 bp
Protein-coding Genes
6349 genes
Non-Coding Genes
126 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 4042115 - 4042126 | Not Available |
| Tyrosine integrase | SAMEA2275861_04160 | Not Available | Positive | 4042496 - 4043725 | 45676.2 |
| uncharacterised protein | SAMEA2275861_04161 | Not Available | Positive | 4043948 - 4044184 | 9042.98 |
| uncharacterised protein | SAMEA2275861_04162 | Not Available | Positive | 4044194 - 4044892 | 26070.8 |
| Minor tail protein | SAMEA2275861_04163 | Not Available | Negative | 4044901 - 4045152 | 9376.44 |
| Holin | SAMEA2275861_04164 | Not Available | Negative | 4045187 - 4045642 | 15031.8 |
| Lysin a | SAMEA2275861_04165 | Not Available | Negative | 4045639 - 4047030 | 50411.2 |
| uncharacterised protein | SAMEA2275861_04166 | Not Available | Negative | 4047027 - 4047176 | 5607.9 |
| Hypothetical protein | SAMEA2275861_04167 | Not Available | Negative | 4047173 - 4047544 | 12099.0 |
| Minor tail protein | SAMEA2275861_04168 | Not Available | Negative | 4047565 - 4048617 | 34568.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
