Micromonospora cremea strain DSM 45599

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora cremea strain DSM 45599 is a Gram-positive, aerobic bacterium that is non-motile and possesses true flagella. This strain is primarily found in the rhizosphere, specifically in rhizospheric soil, where it interacts with plant roots and contributes to soil ecology. Its natural habitat suggests its role in the complex relationships within the soil microbiome, particularly in association with its host, Lathyrus oleraceus. As a spore-forming organism, Micromonospora cremea demonstrates the ability to survive in challenging environmental conditions, which is a significant trait for bacteria residing in the dynamic rhizosphere. With a single replicon, this strain has a streamlined genetic organization that may facilitate efficient replication and adaptability in its niche. The relationship between Micromonospora cremea and Lathyrus oleraceus could reflect broader ecological interactions within the rhizosphere, where beneficial microbes may enhance plant growth, nutrient availability, and soil health. Understanding the specific roles and mechanisms of such bacteria in the rhizosphere could provide insights into sustainable agricultural practices and soil management strategies. The genome accession for this strain is FSQT00000000.1, which may serve as a resource for further research into its genetic features and functional capabilities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora cremea
Strainstrain DSM 45599

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere; rhizospheric soil
Biotic relationshipNot Available
Host(s)Lathyrus oleraceus
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora cremea strain DSM 45599 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6865 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding transcriptional regulator, arsr familySAMN04489832_0033Not AvailablePositive39084 - 3943412659.1
uncharacterized conserved protein yndb, ahsa1/start domainSAMN04489832_0034Not AvailablePositive39436 - 3987916679.7
low temperature requirement protein ltraSAMN04489832_0035Not AvailableNegative39888 - 4109042272.1
fmn phosphatase yigb, had superfamilySAMN04489832_0036Not AvailablePositive41295 - 4268951051.4
l,d-peptidoglycan transpeptidase ykud, erfk/ybis/ycfs/ynhg familySAMN04489832_0037Not AvailablePositive43099 - 4390528180.2
hypothetical proteinSAMN04489832_0038Not AvailableNegative43918 - 441969945.85
hypothetical proteinSAMN04489832_0039Not AvailableNegative44243 - 4467415419.6
hypothetical proteinSAMN04489832_0040Not AvailableNegative44859 - 4560526674.1
transposase, is605 orfb family, central regionSAMN04489832_0041Not AvailableNegative45610 - 4675841911.2
hypothetical proteinSAMN04489832_0042Not AvailableNegative46755 - 4717415821.4

Displaying genes 31 – 40 of 6926 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.