Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1352886 bp
Thymine Count
1368781 bp
Guanine Count
2498683 bp
Cytosine Count
2465473 bp
Genome Length
7686804 bp
Protein-coding Genes
7228 genes
Non-Coding Genes
309 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved membrane protein of uncharacterised function | SAMEA2070599_00362 | Not Available | Positive | 349673 - 350113 | 14744.5 |
| chorismate synthase | SAMEA2070599_00363 | Not Available | Positive | 350171 - 351418 | 43301.5 |
| shikimate kinase (arok) | SAMEA2070599_00364 | Not Available | Positive | 351415 - 352065 | 23195.6 |
| 3-dehydroquinate synthase arob | SAMEA2070599_00365 | Not Available | Positive | 352058 - 353176 | 38985.1 |
| 3-dehydroquinate dehydratase aroq | SAMEA2070599_00366 | Not Available | Positive | 353173 - 353607 | 15214.1 |
| transmembrane protein | SAMEA2070599_00367 | Not Available | Negative | 353580 - 354203 | 22251.9 |
| peptidase yqht | SAMEA2070599_00368 | Not Available | Positive | 354251 - 355303 | 36578.5 |
| elongation factor p (ef-p). | SAMEA2070599_00369 | Not Available | Positive | 355329 - 355892 | 20544.2 |
| probable transcription antitermination factor nusb | SAMEA2070599_00370 | Not Available | Positive | 355885 - 356406 | 18377.7 |
| deazaflavin-dependent nitroreductase family protein | SAMEA2070599_00371 | Not Available | Negative | 356408 - 356836 | 15219.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
