Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1352886 bp
Thymine Count
1368781 bp
Guanine Count
2498683 bp
Cytosine Count
2465473 bp
Genome Length
7686804 bp
Protein-coding Genes
7228 genes
Non-Coding Genes
309 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | SAMEA2070599_06203 | Not Available | Positive | 6246231 - 6247070 | 30086.4 |
| atp-grasp superfamily enzyme | SAMEA2070599_06204 | Not Available | Negative | 6247132 - 6248208 | 38070.8 |
| dna/rna helicase | SAMEA2070599_06205 | Not Available | Positive | 6248383 - 6250656 | 82604.8 |
| d-3-phosphoglycerate dehydrogenase (sera) | SAMEA2070599_06206 | Not Available | Positive | 6250716 - 6251921 | 43167.6 |
| fatty-acid-coa ligase | SAMEA2070599_06207 | Not Available | Positive | 6252007 - 6254067 | 73054.3 |
| transcriptional regulator nrdr | SAMEA2070599_06208 | Not Available | Negative | 6254138 - 6254725 | 21452.4 |
| uncharacterised protein | SAMEA2070599_06209 | Not Available | Negative | 6254781 - 6255434 | 23647.7 |
| thymidylate kinase | SAMEA2070599_06210 | Not Available | Negative | 6256730 - 6257563 | 29828.7 |
| dna topoisomerase 1 | SAMEA2070599_06211 | Not Available | Negative | 6257563 - 6260307 | 99370.9 |
| protein of uncharacterised function (duf1266) | SAMEA2070599_06212 | Not Available | Positive | 6260468 - 6261649 | 43861.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
