Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1352886 bp
Thymine Count
1368781 bp
Guanine Count
2498683 bp
Cytosine Count
2465473 bp
Genome Length
7686804 bp
Protein-coding Genes
7228 genes
Non-Coding Genes
309 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA2070599_04137 | Not Available | Negative | 4136935 - 4137177 | 8708.59 |
| Dna binding protein | SAMEA2070599_04138 | Not Available | Positive | 4137402 - 4137695 | 10815.5 |
| Integrase | SAMEA2070599_04139 | Not Available | Positive | 4137695 - 4138927 | 46475.6 |
| Attl | Not Available | Not Available | Positive | 4138961 - 4138973 | Not Available |
| Trna,type:pseudo,anti_codon:???; | Not Available | Not Available | Positive | 4138948 - 4139026 | Not Available |
| Integrase | SAMEA2070599_04140 | Not Available | Positive | 4139392 - 4140219 | 29291.0 |
| Hypothetical protein | SAMEA2070599_04141 | Not Available | Positive | 4140245 - 4140541 | 10996.0 |
| Hypothetical protein | SAMEA2070599_04142 | Not Available | Negative | 4140592 - 4141776 | 42614.0 |
| uncharacterised protein | SAMEA2070599_04143 | Not Available | Negative | 4141912 - 4142220 | 11325.6 |
| uncharacterised protein | SAMEA2070599_04144 | Not Available | Positive | 4142343 - 4142795 | 15930.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
