Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1352886 bp
Thymine Count
1368781 bp
Guanine Count
2498683 bp
Cytosine Count
2465473 bp
Genome Length
7686804 bp
Protein-coding Genes
7228 genes
Non-Coding Genes
309 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase (carbonate dehydratase) | SAMEA2070599_00001 | Not Available | Positive | 80 - 589 | 17828.6 |
| putative transmembrane protein | SAMEA2070599_00002 | Not Available | Positive | 600 - 1418 | 28760.1 |
| uncharacterised protein | SAMEA2070599_00003 | Not Available | Positive | 1465 - 1620 | 5561.8 |
| putative transcriptional regulator, lysr family | SAMEA2070599_00004 | Not Available | Positive | 1673 - 2566 | 32547.6 |
| doxx family protein | SAMEA2070599_00005 | Not Available | Negative | 2597 - 2962 | 12438.3 |
| putative transcriptional regulator, tetr | SAMEA2070599_00006 | Not Available | Positive | 3083 - 3745 | 24276.1 |
| vibriobactin utilization protein viub | SAMEA2070599_00007 | Not Available | Positive | 3821 - 4651 | 30270.4 |
| tyrosine recombinase xerc | SAMEA2070599_00008 | Not Available | Positive | 4648 - 5562 | 32952.6 |
| uncharacterised protein | SAMEA2070599_00009 | Not Available | Negative | 5566 - 5802 | 8997.0 |
| putative membrane protein mmpl | SAMEA2070599_00010 | Not Available | Negative | 5945 - 8875 | 103371.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
