Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1377248 bp
Thymine Count
1386627 bp
Guanine Count
2426784 bp
Cytosine Count
2413758 bp
Genome Length
7604417 bp
Protein-coding Genes
7219 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA2068975_00764 | Not Available | Negative | 785324 - 785614 | 10726.4 |
| integrase core domain-containing protein | SAMEA2068975_00765 | Not Available | Negative | 785644 - 786057 | 15581.0 |
| transposase (fragment) | SAMEA2068975_00766 | Not Available | Negative | 786174 - 786986 | 30436.5 |
| bacterial regulatory protein, arsr family | SAMEA2068975_00767 | Not Available | Positive | 787842 - 788132 | 10981.3 |
| uncharacterised protein | SAMEA2068975_00768 | Not Available | Positive | 788147 - 788368 | 7919.68 |
| uncharacterised protein | SAMEA2068975_00769 | Not Available | Positive | 788389 - 788490 | 3585.45 |
| transposase is3/is911 family protein | SAMEA2068975_00770 | Not Available | Negative | 788815 - 789156 | 13150.5 |
| uncharacterised protein | SAMEA2068975_00771 | Not Available | Negative | 789327 - 789509 | 6509.74 |
| phage integrase | SAMEA2068975_00772 | Not Available | Positive | 789795 - 790886 | 41303.2 |
| Trna-met | Not Available | Not Available | Positive | 790959 - 791035 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
