Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1377248 bp
Thymine Count
1386627 bp
Guanine Count
2426784 bp
Cytosine Count
2413758 bp
Genome Length
7604417 bp
Protein-coding Genes
7219 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deazaflavin-dependent nitroreductase | SAMEA2068975_07024 | Not Available | Positive | 7254723 - 7255178 | 16528.6 |
| probable cytidine/deoxycytidylate deaminase | SAMEA2068975_07025 | Not Available | Negative | 7255200 - 7255700 | 18898.3 |
| probable cyanate hydratase (cyanase) | SAMEA2068975_07026 | Not Available | Negative | 7255738 - 7256208 | 16661.0 |
| transcription regulator lysr family | SAMEA2068975_07027 | Not Available | Negative | 7256358 - 7257242 | 32175.8 |
| atp-dependent helicase hrpa | SAMEA2068975_07028 | Not Available | Negative | 7257352 - 7261257 | 144588.0 |
| putative short chain dehydrogenase/reductase | SAMEA2068975_07029 | Not Available | Positive | 7261294 - 7262031 | 25223.0 |
| esx-1 secretion-associated protein espi | SAMEA2068975_07030 | Not Available | Negative | 7262028 - 7263239 | 43591.9 |
| uncharacterised protein | SAMEA2068975_07031 | Not Available | Negative | 7263444 - 7263758 | 10929.0 |
| possible nitrate/nitrite response transcriptional regulatory protein narl (luxr family) | SAMEA2068975_07032 | Not Available | Positive | 7263932 - 7264579 | 22908.7 |
| possible two component sensor kinase | SAMEA2068975_07033 | Not Available | Positive | 7264585 - 7265772 | 42648.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
