Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1377248 bp
Thymine Count
1386627 bp
Guanine Count
2426784 bp
Cytosine Count
2413758 bp
Genome Length
7604417 bp
Protein-coding Genes
7219 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA2068975_00621 | Not Available | Positive | 634283 - 635083 | 28698.4 |
| uncharacterised protein | SAMEA2068975_00622 | Not Available | Positive | 635562 - 636104 | 19988.8 |
| emrb/qaca family drug resistance transporter | SAMEA2068975_00623 | Not Available | Negative | 636114 - 636773 | 22460.6 |
| 30s ribosomal protein s1 | SAMEA2068975_00624 | Not Available | Positive | 637401 - 638864 | 53835.9 |
| chorismate synthase | SAMEA2068975_00625 | Not Available | Positive | 639005 - 640225 | 42148.1 |
| shikimate kinase | SAMEA2068975_00626 | Not Available | Positive | 640192 - 640833 | 22974.2 |
| 3-dehydroquinate synthase | SAMEA2068975_00627 | Not Available | Positive | 640820 - 641917 | 39182.7 |
| predicted membrane protein | SAMEA2068975_00628 | Not Available | Negative | 641960 - 642766 | 28401.1 |
| dephospho-coa kinase | SAMEA2068975_00629 | Not Available | Positive | 642846 - 643520 | 24229.4 |
| excinuclease abc subunit b uvrb | SAMEA2068975_00630 | Not Available | Positive | 643544 - 645643 | 79535.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
