Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1377248 bp
Thymine Count
1386627 bp
Guanine Count
2426784 bp
Cytosine Count
2413758 bp
Genome Length
7604417 bp
Protein-coding Genes
7219 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hydrolase, alpha/beta fold family | SAMEA2068975_06399 | Not Available | Negative | 6591582 - 6592382 | 29263.4 |
| heme-degrading monooxygenase isdg | SAMEA2068975_06400 | Not Available | Positive | 6592426 - 6592743 | 11255.3 |
| probable conserved lipoprotein lpqf | SAMEA2068975_06401 | Not Available | Positive | 6592740 - 6594080 | 48055.0 |
| putative cobalt transporter subunit (cbta) | SAMEA2068975_06402 | Not Available | Negative | 6594133 - 6594921 | 27493.1 |
| putative cobalt transporter subunit (cbtb) | SAMEA2068975_06403 | Not Available | Negative | 6594943 - 6595149 | 7452.03 |
| abc transporter permease protein yvrb | SAMEA2068975_06405 | Not Available | Positive | 6595632 - 6596684 | 35208.0 |
| putative iron compound abc transporter, atp-binding protein | SAMEA2068975_06406 | Not Available | Positive | 6596684 - 6597469 | 27780.1 |
| putative iron compound abc transporter, substrate-binding protein | SAMEA2068975_06407 | Not Available | Positive | 6597466 - 6598458 | 35797.0 |
| atpase with chaperone activity, atp-binding subunit | SAMEA2068975_06408 | Not Available | Negative | 6598644 - 6601178 | 93233.5 |
| protein lsr2 precursor | SAMEA2068975_06409 | Not Available | Negative | 6601458 - 6601802 | 12409.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
