Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1377248 bp
Thymine Count
1386627 bp
Guanine Count
2426784 bp
Cytosine Count
2413758 bp
Genome Length
7604417 bp
Protein-coding Genes
7219 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s9, prolyl oligopeptidase active site region | SAMEA2068975_00531 | Not Available | Positive | 530743 - 532770 | 74286.8 |
| alkaline phosphatase | SAMEA2068975_00532 | Not Available | Positive | 532963 - 535623 | 93678.9 |
| peptidase t | SAMEA2068975_00533 | Not Available | Negative | 535706 - 536959 | 45454.3 |
| uncharacterised protein | SAMEA2068975_00534 | Not Available | Negative | 536986 - 537612 | 21581.5 |
| uncharacterized protein conserved in bacteria | SAMEA2068975_00535 | Not Available | Negative | 537647 - 538342 | 24451.4 |
| putative pyrimidine dimer dna glycosylase | SAMEA2068975_00536 | Not Available | Positive | 538478 - 538909 | 16260.4 |
| predicted co/zn/cd cation transporters | SAMEA2068975_00537 | Not Available | Positive | 538894 - 539502 | 20876.9 |
| short-chain dehydrogenase of uncharacterised substrate specificity | SAMEA2068975_00538 | Not Available | Negative | 539537 - 540388 | 29707.1 |
| uncharacterised protein | SAMEA2068975_00539 | Not Available | Negative | 540385 - 540549 | 5842.97 |
| sigma-70, region 4 | SAMEA2068975_00540 | Not Available | Positive | 540690 - 541043 | 12810.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
