Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1377248 bp
Thymine Count
1386627 bp
Guanine Count
2426784 bp
Cytosine Count
2413758 bp
Genome Length
7604417 bp
Protein-coding Genes
7219 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable succinate dehydrogenase (cytochrome b-556 subunit) sdhc | SAMEA2068975_00321 | Not Available | Negative | 305216 - 305638 | 15928.8 |
| cytidine deaminase | SAMEA2068975_00322 | Not Available | Positive | 305898 - 306296 | 14179.1 |
| probable thymidine phosphorylase deoa | SAMEA2068975_00323 | Not Available | Positive | 306296 - 307585 | 43739.8 |
| adenosine deaminase | SAMEA2068975_00324 | Not Available | Positive | 307582 - 308670 | 39376.9 |
| uncharacterised protein | SAMEA2068975_00325 | Not Available | Negative | 308677 - 310005 | 48485.5 |
| uncharacterised protein | SAMEA2068975_00326 | Not Available | Negative | 310101 - 311099 | 36311.3 |
| uncharacterised protein | SAMEA2068975_00327 | Not Available | Negative | 311163 - 312059 | 32389.8 |
| uncharacterised bcr, ybab family cog0718 | SAMEA2068975_00328 | Not Available | Negative | 312578 - 312919 | 12219.5 |
| uncharacterised protein | SAMEA2068975_00329 | Not Available | Negative | 312919 - 313272 | 12827.3 |
| endopeptidase yddh | SAMEA2068975_00330 | Not Available | Negative | 313247 - 314599 | 44351.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
