Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1377248 bp
Thymine Count
1386627 bp
Guanine Count
2426784 bp
Cytosine Count
2413758 bp
Genome Length
7604417 bp
Protein-coding Genes
7219 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophanyl-trna synthetase (trps) | SAMEA2068975_00311 | Not Available | Positive | 294200 - 295222 | 37104.0 |
| inner membrane protein yhjd | SAMEA2068975_00312 | Not Available | Positive | 295245 - 296270 | 36712.2 |
| probable penicillin-binding protein dacb1 | SAMEA2068975_00313 | Not Available | Negative | 296267 - 297583 | 45578.4 |
| strictosidine synthase family protein | SAMEA2068975_00314 | Not Available | Negative | 297622 - 298650 | 35964.1 |
| predicted o-linked n-acetylglucosamine transferase, spindly family | SAMEA2068975_00315 | Not Available | Positive | 298846 - 300537 | 61588.8 |
| probable alternative rna polymerase sigma factor sigj | SAMEA2068975_00316 | Not Available | Positive | 300563 - 301471 | 33010.4 |
| possible transposase fusion protein | SAMEA2068975_00317 | Not Available | Negative | 301468 - 302133 | 24443.2 |
| probable succinate dehydrogenase (iron-sulphur protein) sdhb | SAMEA2068975_00318 | Not Available | Negative | 302173 - 302955 | 29057.2 |
| succinate dehydrogenase | SAMEA2068975_00319 | Not Available | Negative | 302957 - 304723 | 64846.0 |
| probable succinate dehydrogenase, hydrophobic membrane anchor protein sdhd | SAMEA2068975_00320 | Not Available | Negative | 304737 - 305219 | 18327.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
