Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1833049 bp
Thymine Count
1826637 bp
Guanine Count
3495324 bp
Cytosine Count
3499830 bp
Genome Length
10940097 bp
Protein-coding Genes
11012 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | SAMEA2259605_00474 | Not Available | Positive | 497314 - 498072 | 25876.1 |
| isochorismatase (phenazine biosynthesis) phzd | SAMEA2259605_00475 | Not Available | Positive | 498076 - 498711 | 23578.3 |
| putative phenazine biosynthesis protein phze | SAMEA2259605_00476 | Not Available | Positive | 498708 - 500564 | 66656.5 |
| uncharacterised protein | SAMEA2259605_00477 | Not Available | Positive | 502018 - 502176 | 5664.79 |
| carboxylesterase | SAMEA2259605_00478 | Not Available | Positive | 502685 - 503467 | 27189.4 |
| putative monooxygenase | SAMEA2259605_00479 | Not Available | Positive | 504409 - 504645 | 8292.97 |
| putative dioxygenase (1h-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase) | SAMEA2259605_00480 | Not Available | Positive | 504642 - 505451 | 29732.3 |
| uncharacterised protein | SAMEA2259605_00481 | Not Available | Negative | 505400 - 505693 | 9561.19 |
| putative aminotransferase | SAMEA2259605_00483 | Not Available | Positive | 505961 - 507244 | 46347.3 |
| uncharacterised protein | SAMEA2259605_00484 | Not Available | Negative | 507241 - 507897 | 22508.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
