Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1833049 bp
Thymine Count
1826637 bp
Guanine Count
3495324 bp
Cytosine Count
3499830 bp
Genome Length
10940097 bp
Protein-coding Genes
11012 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase | SAMEA2259605_03126 | Not Available | Negative | 3077607 - 3079322 | 59532.2 |
| transmembrane anti-sigma factor | SAMEA2259605_03127 | Not Available | Negative | 3079397 - 3080125 | 25716.7 |
| rna polymerase sigma factor, sigma-70 family | SAMEA2259605_03128 | Not Available | Negative | 3080122 - 3080646 | 19701.2 |
| methionine aminopeptidase, type i | SAMEA2259605_03129 | Not Available | Negative | 3080698 - 3081501 | 27934.3 |
| adenylate kinase | SAMEA2259605_03130 | Not Available | Negative | 3081530 - 3082075 | 19769.7 |
| protein translocase subunit secy/sec61 alpha | SAMEA2259605_03131 | Not Available | Negative | 3082072 - 3083397 | 47547.1 |
| o-methyltransferase | SAMEA2259605_03132 | Not Available | Positive | 3083725 - 3084651 | 33139.7 |
| o-methyltransferase | SAMEA2259605_03133 | Not Available | Positive | 3084673 - 3085602 | 33200.2 |
| methyltransferase, putative, tigr00027 family | SAMEA2259605_03134 | Not Available | Positive | 3085616 - 3086527 | 33274.0 |
| o-methyltransferase | SAMEA2259605_03135 | Not Available | Positive | 3086532 - 3087449 | 32932.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
