Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1833049 bp
Thymine Count
1826637 bp
Guanine Count
3495324 bp
Cytosine Count
3499830 bp
Genome Length
10940097 bp
Protein-coding Genes
11012 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyl-coa transferase | SAMEA2259605_00039 | Not Available | Positive | 49590 - 50549 | 33872.4 |
| formyl-coa transferase | SAMEA2259605_00040 | Not Available | Positive | 50543 - 50827 | 9813.76 |
| hydroxymethylglutaryl-coa lyase | SAMEA2259605_00041 | Not Available | Positive | 50824 - 51726 | 31211.0 |
| polyketide cyclase / dehydrase and lipid transport | SAMEA2259605_00042 | Not Available | Positive | 51886 - 52440 | 19618.8 |
| tetr family transcriptional regulator | SAMEA2259605_00043 | Not Available | Negative | 52430 - 53050 | 22533.9 |
| tetr family transcriptional regulator | SAMEA2259605_00044 | Not Available | Negative | 53131 - 53715 | 20969.4 |
| fadd27 | SAMEA2259605_00045 | Not Available | Negative | 53712 - 54641 | 35803.2 |
| uncharacterised protein | SAMEA2259605_00046 | Not Available | Negative | 54769 - 54993 | 7701.3 |
| gntr family transcriptional regulator | SAMEA2259605_00047 | Not Available | Positive | 55143 - 55808 | 24277.9 |
| amidase | SAMEA2259605_00048 | Not Available | Positive | 55904 - 57349 | 51843.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
