Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1833049 bp
Thymine Count
1826637 bp
Guanine Count
3495324 bp
Cytosine Count
3499830 bp
Genome Length
10940097 bp
Protein-coding Genes
11012 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major tail subunit | SAMEA2259605_00609 | Not Available | Negative | 630757 - 631653 | 31892.6 |
| Head-to-tail connector | SAMEA2259605_00610 | Not Available | Negative | 631693 - 632175 | 18261.7 |
| Head-to-tail connector | SAMEA2259605_00611 | Not Available | Negative | 632168 - 632551 | 13765.8 |
| Hypothetical protein | SAMEA2259605_00612 | Not Available | Negative | 632544 - 632882 | 12403.4 |
| Head-to-tail connector | SAMEA2259605_00613 | Not Available | Negative | 632876 - 633382 | 18442.0 |
| Major capsid protein | SAMEA2259605_00614 | Not Available | Negative | 633392 - 634564 | 41967.2 |
| Gp7 | SAMEA2259605_00615 | Not Available | Negative | 634614 - 635255 | 23802.6 |
| Capsid maturation protease | SAMEA2259605_00616 | Not Available | Negative | 635311 - 636447 | 41425.7 |
| Portal protein | SAMEA2259605_00617 | Not Available | Negative | 636458 - 637930 | 53732.1 |
| Terminase | SAMEA2259605_00618 | Not Available | Negative | 637932 - 639449 | 55592.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
