Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1833049 bp
Thymine Count
1826637 bp
Guanine Count
3495324 bp
Cytosine Count
3499830 bp
Genome Length
10940097 bp
Protein-coding Genes
11012 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide methionine sulfoxide reductase msrb | SAMEA2259605_02337 | Not Available | Negative | 2282057 - 2282446 | 14690.1 |
| arabinosyltransferase aftc | SAMEA2259605_02338 | Not Available | Negative | 2282403 - 2283767 | 50919.7 |
| hydrolase | SAMEA2259605_02339 | Not Available | Negative | 2283813 - 2284418 | 21039.1 |
| uncharacterised protein | SAMEA2259605_02340 | Not Available | Positive | 2284851 - 2285465 | 21081.2 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMEA2259605_02341 | Not Available | Negative | 2285415 - 2286197 | 26686.8 |
| afg1-like atpase | SAMEA2259605_02342 | Not Available | Positive | 2286231 - 2287277 | 37606.7 |
| trna (guanine-n(1)-)-methyltransferase | SAMEA2259605_02343 | Not Available | Negative | 2287246 - 2287785 | 19201.8 |
| putative methyltransferase | SAMEA2259605_02344 | Not Available | Positive | 2287849 - 2288604 | 27721.0 |
| exported alanine and valine rich protein | SAMEA2259605_02345 | Not Available | Negative | 2288626 - 2289138 | 18463.2 |
| putative oxidoreductase | SAMEA2259605_02346 | Not Available | Positive | 2289252 - 2290274 | 36001.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
