Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1833049 bp
Thymine Count
1826637 bp
Guanine Count
3495324 bp
Cytosine Count
3499830 bp
Genome Length
10940097 bp
Protein-coding Genes
11012 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative zn-dependent protease-like protein | SAMEA2259605_01725 | Not Available | Negative | 1706586 - 1707584 | 35822.4 |
| bacteriophage protein | SAMEA2259605_01726 | Not Available | Positive | 1708240 - 1709088 | 30384.1 |
| uncharacterised protein | SAMEA2259605_01727 | Not Available | Positive | 1709231 - 1709557 | 12095.1 |
| uncharacterised protein | SAMEA2259605_01728 | Not Available | Negative | 1709566 - 1709808 | 8646.39 |
| uncharacterised protein | SAMEA2259605_01729 | Not Available | Negative | 1709941 - 1710423 | 17673.7 |
| transcription initiation factor tfiid, subunit taf12 (also component of histone acetyltransferase saga) | SAMEA2259605_01730 | Not Available | Negative | 1710467 - 1712926 | 84375.8 |
| uncharacterised protein | SAMEA2259605_01731 | Not Available | Positive | 1713447 - 1714073 | 23414.5 |
| uncharacterised protein | SAMEA2259605_01732 | Not Available | Negative | 1713957 - 1714292 | 12458.5 |
| monooxygenase | SAMEA2259605_01733 | Not Available | Negative | 1714670 - 1715164 | 18656.4 |
| rna polymerase sigma factor rpoe | SAMEA2259605_01734 | Not Available | Negative | 1715187 - 1715879 | 26005.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
