Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1833049 bp
Thymine Count
1826637 bp
Guanine Count
3495324 bp
Cytosine Count
3499830 bp
Genome Length
10940097 bp
Protein-coding Genes
11012 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SAMEA2259605_01715 | Not Available | Positive | 1694161 - 1694583 | 15810.7 |
| dna-binding protein, excisionase family | SAMEA2259605_01716 | Not Available | Positive | 1694585 - 1694896 | 11567.1 |
| site-specific recombinase xerd | SAMEA2259605_01717 | Not Available | Positive | 1694893 - 1696245 | 49973.3 |
| atpase involved in dna repair | SAMEA2259605_01718 | Not Available | Positive | 1696414 - 1699002 | 92976.3 |
| Trna-met | Not Available | Not Available | Positive | 1700819 - 1700895 | Not Available |
| ectoine hydroxylase | SAMEA2259605_01720 | Not Available | Positive | 1700983 - 1702224 | 45358.4 |
| acyl-coa thioesterase | SAMEA2259605_01721 | Not Available | Positive | 1702250 - 1703062 | 29542.5 |
| protein of uncharacterised function duf222 | SAMEA2259605_01722 | Not Available | Negative | 1703198 - 1704601 | 50262.8 |
| uncharacterised protein | SAMEA2259605_01723 | Not Available | Negative | 1704720 - 1705541 | 29530.0 |
| l-threonine aldolase | SAMEA2259605_01724 | Not Available | Positive | 1705577 - 1706602 | 36514.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
