Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1833049 bp
Thymine Count
1826637 bp
Guanine Count
3495324 bp
Cytosine Count
3499830 bp
Genome Length
10940097 bp
Protein-coding Genes
11012 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ps1 | SAMEA2259605_01535 | Not Available | Positive | 1507036 - 1507659 | 20902.3 |
| chab family protein | SAMEA2259605_01536 | Not Available | Negative | 1507745 - 1508161 | 15338.9 |
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | SAMEA2259605_01537 | Not Available | Negative | 1508192 - 1508458 | 9451.31 |
| catalase | SAMEA2259605_01538 | Not Available | Negative | 1508493 - 1510601 | 77645.3 |
| membrane protein | SAMEA2259605_01539 | Not Available | Negative | 1510696 - 1510977 | 10144.7 |
| uncharacterised protein | SAMEA2259605_01540 | Not Available | Positive | 1511557 - 1512048 | 16150.9 |
| dna polymerase iv | SAMEA2259605_01541 | Not Available | Positive | 1512416 - 1513621 | 43413.3 |
| 27 kda antigen cfp30b | SAMEA2259605_01542 | Not Available | Negative | 1513647 - 1514429 | 27700.1 |
| protein of uncharacterised function (duf328) | SAMEA2259605_01543 | Not Available | Positive | 1514555 - 1515301 | 26293.6 |
| uncharacterised protein | SAMEA2259605_01544 | Not Available | Negative | 1515291 - 1516619 | 45067.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
