Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1833049 bp
Thymine Count
1826637 bp
Guanine Count
3495324 bp
Cytosine Count
3499830 bp
Genome Length
10940097 bp
Protein-coding Genes
11012 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, possibly involved in aromatic compounds catabolism | SAMEA2259605_00729 | Not Available | Positive | 687253 - 687711 | 16217.3 |
| putative transcription regulator protein | SAMEA2259605_00730 | Not Available | Negative | 687723 - 688445 | 26444.7 |
| Hypothetical protein | SAMEA2259605_00731 | Not Available | Positive | 688526 - 689317 | 27523.2 |
| Hypothetical protein | SAMEA2259605_00732 | Not Available | Positive | 689350 - 690339 | 35205.5 |
| Attl | Not Available | Not Available | Positive | 1934976 - 1935055 | Not Available |
| Integrase | SAMEA2259605_01957 | Not Available | Positive | 1935235 - 1936086 | 31127.1 |
| uncharacterised protein | SAMEA2259605_01958 | Not Available | Positive | 1936121 - 1936372 | 8984.66 |
| Gp36 | SAMEA2259605_01959 | Not Available | Positive | 1936396 - 1936743 | 12404.7 |
| uncharacterised protein | SAMEA2259605_01960 | Not Available | Negative | 1936775 - 1936927 | 5771.86 |
| uncharacterised protein | SAMEA2259605_01961 | Not Available | Positive | 1937007 - 1937306 | 11014.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
