Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1274955 bp
Thymine Count
1277130 bp
Guanine Count
2258965 bp
Cytosine Count
2271827 bp
Genome Length
7083990 bp
Protein-coding Genes
7641 genes
Non-Coding Genes
206 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA2071372_01126 | Not Available | Positive | 1005576 - 1006004 | 15939.1 |
| uncharacterised protein | SAMEA2071372_01127 | Not Available | Positive | 1006453 - 1006698 | 8183.88 |
| uncharacterised protein | SAMEA2071372_01128 | Not Available | Positive | 1006695 - 1007135 | 15306.6 |
| dna binding domain, excisionase family | SAMEA2071372_01129 | Not Available | Positive | 1007132 - 1007521 | 13874.5 |
| Capsid maturation protease | SAMEA2071372_01130 | Not Available | Positive | 1007550 - 1008110 | 19366.2 |
| Hypothetical protein | SAMEA2071372_01131 | Not Available | Positive | 1008114 - 1008494 | 12355.7 |
| Major capsid protein | SAMEA2071372_01132 | Not Available | Positive | 1008509 - 1009384 | 31768.9 |
| Capsid maturation protease | SAMEA2071372_01133 | Not Available | Positive | 1009405 - 1009875 | 16120.0 |
| Attr | Not Available | Not Available | Positive | 1014499 - 1014528 | Not Available |
| Attl | Not Available | Not Available | Positive | 1201469 - 1201485 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
