Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1274955 bp
Thymine Count
1277130 bp
Guanine Count
2258965 bp
Cytosine Count
2271827 bp
Genome Length
7083990 bp
Protein-coding Genes
7641 genes
Non-Coding Genes
206 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA2071372_00224 | Not Available | Negative | 144161 - 144532 | 12716.2 |
| Excise | SAMEA2071372_00225 | Not Available | Negative | 144625 - 144873 | 9088.69 |
| Gp49 | SAMEA2071372_00226 | Not Available | Negative | 144870 - 145196 | 12018.4 |
| Antirepressor | SAMEA2071372_00227 | Not Available | Negative | 145196 - 145921 | 27198.3 |
| Immunity repressor | SAMEA2071372_00228 | Not Available | Positive | 146228 - 147196 | 35554.2 |
| Attl | Not Available | Not Available | Positive | 1003075 - 1003104 | Not Available |
| Tyrosine integrase | SAMEA2071372_01122 | Not Available | Negative | 1003106 - 1004293 | 43878.3 |
| Transcriptional repressor | SAMEA2071372_01123 | Not Available | Negative | 1004271 - 1004747 | 17322.7 |
| Excise | SAMEA2071372_01124 | Not Available | Positive | 1004819 - 1005013 | 7088.62 |
| uncharacterised protein | SAMEA2071372_01125 | Not Available | Positive | 1005187 - 1005552 | 12912.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
