Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1274955 bp
Thymine Count
1277130 bp
Guanine Count
2258965 bp
Cytosine Count
2271827 bp
Genome Length
7083990 bp
Protein-coding Genes
7641 genes
Non-Coding Genes
206 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable lysyl-trna synthetase 2 lysx | SAMEA2071372_00421 | Not Available | Negative | 339455 - 342787 | 122159.0 |
| uncharacterised protein | SAMEA2071372_00422 | Not Available | Negative | 342845 - 343267 | 15016.4 |
| translation initiation factor if-3 (infc) | SAMEA2071372_00423 | Not Available | Positive | 343570 - 344100 | 19465.2 |
| 50s ribosomal protein l35 | SAMEA2071372_00424 | Not Available | Positive | 344132 - 344326 | 7222.87 |
| 50s ribosomal protein l20 | SAMEA2071372_00425 | Not Available | Positive | 344389 - 344778 | 14469.5 |
| possible trna/rrna methyltransferase | SAMEA2071372_00426 | Not Available | Positive | 344823 - 345575 | 25904.1 |
| possible trna/rrna methyltransferase | SAMEA2071372_00427 | Not Available | Positive | 345717 - 346469 | 25807.9 |
| putative short-chain dehydrogenase/reductase | SAMEA2071372_00428 | Not Available | Positive | 346536 - 347492 | 33816.6 |
| Trna-cys | Not Available | Not Available | Positive | 347562 - 347635 | Not Available |
| esat-6 | SAMEA2071372_00430 | Not Available | Negative | 347679 - 347981 | 10728.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
