Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1274955 bp
Thymine Count
1277130 bp
Guanine Count
2258965 bp
Cytosine Count
2271827 bp
Genome Length
7083990 bp
Protein-coding Genes
7641 genes
Non-Coding Genes
206 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Minor tail protein | SAMEA2071372_01779 | Not Available | Negative | 1616595 - 1616954 | 12463.5 |
| uncharacterised protein | SAMEA2071372_01780 | Not Available | Negative | 1616954 - 1617361 | 14902.5 |
| Head-to-tail adaptor | SAMEA2071372_01781 | Not Available | Negative | 1617361 - 1617723 | 13370.2 |
| Head-to-tail connector protein | SAMEA2071372_01782 | Not Available | Negative | 1617728 - 1618177 | 15714.6 |
| Major capsid protein | SAMEA2071372_01783 | Not Available | Negative | 1618177 - 1619088 | 33151.3 |
| Hypothetical protein | SAMEA2071372_01784 | Not Available | Negative | 1619105 - 1619482 | 12491.6 |
| Capsid maturation protease | SAMEA2071372_01785 | Not Available | Negative | 1619486 - 1620739 | 44095.4 |
| Portal protein | SAMEA2071372_01786 | Not Available | Negative | 1620733 - 1622181 | 52128.2 |
| Terminase large subunit | SAMEA2071372_01787 | Not Available | Negative | 1622196 - 1622801 | 21527.7 |
| Minor tail protein | SAMEA2071372_03481 | Not Available | Positive | 3160302 - 3161285 | 31427.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
